PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU14940.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 257aa    MW: 28114.5 Da    PI: 7.5478
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU14940.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.8e-13192237655
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +++Er RR ri +++ +L+el+P+     +k  + a++Le+AveY+k Lq
  PHU14940.1 192 SIAERVRRTRISDRIRKLQELVPNM----DKQTNTADMLEEAVEYVKFLQ 237
                 689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MQRGATGTGA GGGLSRFRSA PATWLEALLE SDDTENETEV VLNPSSPILH TPNKPPPHPS  60
STHKLPELKM DPGLFESVGG STSSSFLRQN SSPAEFLAQI SSDAGGYFSS YGIPSSLEYL  120
SPSVDVSQSV KRGREGNSES SPRKLKSQLK GEPSGQLHGS GGSLDAEMEK LMDDLVPCKV  180
RAKRGCATHP RSIAERVRRT RISDRIRKLQ ELVPNMDKQT NTADMLEEAV EYVKFLQRQI  240
QELTEHQKKC TCSMKDQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G35460.12e-62bHLH family protein