PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15256.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 204aa MW: 23304.1 Da PI: 8.1739

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15256.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	61	83	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ F ++ L H++ H PHU15256.1 61 FSCNYCHRNFYSSQALGGHQNAH 83 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 204 aa Download sequence
MSSQNQSGQQ QNDEHDNNGL ILDLTLLCNW DSKPSDDHTF HTISSSDDSQ GNNDEKEHQV 60 FSCNYCHRNF YSSQALGGHQ NAHKRERITI AKRKQNMASM PIMHGSFHRS LGIQAHSMIQ 120 KPVMSFNTFR APAFPLLYNT HSAGWWSRRR MDQLPAIGRL IMPESHGTGR LNFGNMNKFP 180 VVIDSHLMTN HQEDSKMLDL SLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10970.1	5e-29	C2H2 family protein