PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU15348.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 126aa    MW: 14788.5 Da    PI: 8.9251
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU15348.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding43.47.8e-1472116347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
       PHU15348.1  72 PWTKEEHRLFLLGLERYGKGDWRSISRNIVISRTPSQVASHAQKY 116
                      8*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 126 aa     Download sequence    
MVPNKTIDEL KQHYQLLVDD VTAIEYGYVP IPNYTVEENS YGYSRVSRDD WQSNGNEFAE  60
TAQCPERRKG TPWTKEEHRL FLLGLERYGK GDWRSISRNI VISRTPSQVA SHAQKYFNRL  120
KKNQHP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.18e-45MYB family protein