PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15555.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YC

Protein Properties

Length: 254aa MW: 27308.7 Da PI: 4.7586

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	172.5	4.6e-54	43	147	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+atdfknh+lPlarikki+kadedv+misae+Pvl++kace+fi eltlrsw+h+eenkr+tl+k+diaaa++rtd+fdflvdi+ PHU15555.1 43 QLQMFWNYQrqeIEQATDFKNHQLPLARIKKIMKADEDVRMISAETPVLFAKACEMFIQELTLRSWIHSEENKRKTLQKNDIAAAISRTDTFDFLVDII 141 89***998899********************************************************************************** PP NF-YC 97 prdelk 102 prde+k PHU15555.1 142 PRDEVK 147 *875 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MDNNNNTHQS PAEASAAAAA AAAAAQSAAY PPETPYDHVL QQQLQMFWNY QRQEIEQATD 60 FKNHQLPLAR IKKIMKADED VRMISAETPV LFAKACEMFI QELTLRSWIH SEENKRKTLQ 120 KNDIAAAISR TDTFDFLVDI IPRDEVKDEG VGLGLAPGGV PYYYPPLGQP APGGVMLGRP 180 AGVVPGAVPG VVPGTVPGTV PGVVPGAVPG VDPSMYVPHL PFQVWQSMWQ TSEDHSYPSG 240 GGSSSGQGTN DSQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	3e-67	NF-YC family protein