PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15558.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YC

Protein Properties

Length: 345aa MW: 37670.3 Da PI: 4.6734

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15558.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	169.6	3.8e-53	43	147	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+atdfknh+lPlarikki+kadedv+misae+Pvl++kace+fi eltlrsw+h+eenkr+tl+k+diaaa++rtd+fdflvdi+ PHU15558.1 43 QLQMFWNYQrqeIEQATDFKNHQLPLARIKKIMKADEDVRMISAETPVLFAKACEIFIQELTLRSWIHSEENKRKTLQKNDIAAAISRTDTFDFLVDII 141 89***998899********************************************************************************** PP NF-YC 97 prdelk 102 prde+k PHU15558.1 142 PRDEVK 147 *875 PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MDNNHNTHQS PAEASAAAAA AAAAAQSAAY PPETPYDHVL QQQLQMFWNY QRQEIEQATD 60 FKNHQLPLAR IKKIMKADED VRMISAETPV LFAKACEIFI QELTLRSWIH SEENKRKTLQ 120 KNDIAAAISR TDTFDFLVDI IPRDEVKDEG VGLGLAPGGV PFYYPPLGQP APGGVMLGRP 180 AVPAGVVPGA VPGVVPGTVL GTVPGVVPGA VPGVDPSMYE PHLPFQVWQS MWQTSEDHSY 240 PSGGGSSSGQ GTDDSQIDDF PLCYDYWAYR DDFSLGHDEQ AAASADGRPP PALSSSADLR 300 PLNMDDFRYS HQQFLLASFI QQLDLIRKIR DLPIAGMRTI PFNKS

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MDNNHNTHQS PAEASAAAAA AAAAAQSAAY PPETPYDHVL QQQLQMFWNY QRQEIEQATD  60
FKNHQLPLAR IKKIMKADED VRMISAETPV LFAKACEIFI QELTLRSWIH SEENKRKTLQ  120
KNDIAAAISR TDTFDFLVDI IPRDEVKDEG VGLGLAPGGV PFYYPPLGQP APGGVMLGRP  180
AVPAGVVPGA VPGVVPGTVL GTVPGVVPGA VPGVDPSMYE PHLPFQVWQS MWQTSEDHSY  240
PSGGGSSSGQ GTDDSQIDDF PLCYDYWAYR DDFSLGHDEQ AAASADGRPP PALSSSADLR  300
PLNMDDFRYS HQQFLLASFI QQLDLIRKIR DLPIAGMRTI PFNKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	2e-71	NF-YC family protein