PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15579.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YC

Protein Properties

Length: 243aa MW: 26333.5 Da PI: 5.2493

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15579.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	179.2	3.8e-56	51	155	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdiv 96 ql++fw++q ie+a+dfknh+lPlarikki+kadedv+misaeaPvl++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdflvdiv PHU15579.1 51 QLQMFWNYQrqeIEQANDFKNHQLPLARIKKIMKADEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIV 149 89***998899********************************************************************************** PP NF-YC 97 prdelk 102 prde+k PHU15579.1 150 PRDEVK 155 *875 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MDNNTNTHQS PTDASAAAAA AAATAAQSAS AVAAYPGQTP YHHLLQQQQQ QLQMFWNYQR 60 QEIEQANDFK NHQLPLARIK KIMKADEDVR MISAEAPVLF AKACELFILE LTIRSWLHAE 120 ENKRRTLQKN DIAAAITRTD IFDFLVDIVP RDEVKDEGVG LGLGPGIVGP TASGVPYYYP 180 PLGQPAPGGV MLGRPAVPGV DPSMYVHPPP SQAWQSVWQT SEEHSYPSGG GSSSGQGNVD 240 GQM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	124	130	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	1e-96	NF-YC family protein