PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15641.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 480aa MW: 54038.9 Da PI: 5.9779

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15641.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.8	4.9e-35	14	106	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d ++++++sws+++nsfvv++ ef++++LpkyFkh+nf+SFvRQLn+Yg+kkv+ ++ weF+++ F +g+k+ll++i PHU15641.1 14 FLSKTYDMVDDLSTDSVVSWSKSNNSFVVWNVPEFTRHILPKYFKHNNFSSFVRQLNTYGYKKVDPDS---------WEFANEGFLRGHKHLLKTIS 101 9**************************************************************998.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+k + PHU15641.1 102 RRKPS 106 976 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MEGVTEIGNP PPPFLSKTYD MVDDLSTDSV VSWSKSNNSF VVWNVPEFTR HILPKYFKHN 60 NFSSFVRQLN TYGYKKVDPD SWEFANEGFL RGHKHLLKTI SRRKPSQMQV HQETASQVKS 120 LSVGSCDEVG KTGIEEEVER LKKDKSIHME ELVKLRQQQQ ATDHCLENVG QRLQLMEQRE 180 QQTMSFLAKA LQSPGFLAEL FHQQNESKRF ITGMNKKRRF PSQEEENYAG KQVSPLHNRQ 240 IVRYQPLLNE AAKALLQKLL KTNTSGWLET KVKNTHGFLT NRSRSFENTL ETGGISPHIS 300 GVTLPQLPTS SPSHLMSDSG FPFNSTLSVI PEIQYSPSLV PGEAKVPQFP ELNALNSQID 360 HVNPEFLGHG IDTLETLERT DLKPSETGNM PHIDTMQGIE DGVTSVPDGF STNNVISDEM 420 PKLPGINDIF WDQILLASPL IGYKDEIGSL ALEDGLAKEE DVPGVQESDC DKLKRICHLT

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MEGVTEIGNP PPPFLSKTYD MVDDLSTDSV VSWSKSNNSF VVWNVPEFTR HILPKYFKHN  60
NFSSFVRQLN TYGYKKVDPD SWEFANEGFL RGHKHLLKTI SRRKPSQMQV HQETASQVKS  120
LSVGSCDEVG KTGIEEEVER LKKDKSIHME ELVKLRQQQQ ATDHCLENVG QRLQLMEQRE  180
QQTMSFLAKA LQSPGFLAEL FHQQNESKRF ITGMNKKRRF PSQEEENYAG KQVSPLHNRQ  240
IVRYQPLLNE AAKALLQKLL KTNTSGWLET KVKNTHGFLT NRSRSFENTL ETGGISPHIS  300
GVTLPQLPTS SPSHLMSDSG FPFNSTLSVI PEIQYSPSLV PGEAKVPQFP ELNALNSQID  360
HVNPEFLGHG IDTLETLERT DLKPSETGNM PHIDTMQGIE DGVTSVPDGF STNNVISDEM  420
PKLPGINDIF WDQILLASPL IGYKDEIGSL ALEDGLAKEE DVPGVQESDC DKLKRICHLT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-107	HSF family protein