PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU15758.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 347aa    MW: 39820 Da    PI: 6.4008
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU15758.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1933.8e-29138225291
        FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                 fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  PHU15758.1 138 FYNAYATRVGFIIRVSKLSRSRRDGSAIGRALVCNKEGFRMPDKRE--KIVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHSHPLCP 225
                 ******************************************9988..9***************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MSVGLARGPT SLTEFGGLDS ACHEIKRYQL ADQRERLFEM AHDRKAYRLN QVEFVVDDHI  60
NGEEEEGTVV ELRAVDENVI GGSSSEEALQ QVHDVKVDED LPEREDLLLE EAQCLDNSTS  120
DEPYVGLEFE SEAAAHAFYN AYATRVGFII RVSKLSRSRR DGSAIGRALV CNKEGFRMPD  180
KREKIVRQRA ETRVGCRAMI LVRKVNSGKW VVTKFVKEHS HPLCPGKGRR DLIYDQYPNE  240
HDKIRELSQQ LAAEKKRSAT YKRHLEMIFE HIEEHNQSLS KKIQDIVHND EKEELTAELR  300
IKKRLTAACR EQLLSLMKDV ESHTEHLSTI KPFIPSCPLK GEPWSNW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-90FAR1 family protein