PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15760.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

DBB

Protein Properties

Length: 233aa MW: 25922.5 Da PI: 4.6765

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	18	6.1e-06	4	43	5	38
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +e+ +++ C ++ lC++C e H H+ PHU15760.1 4 QCDVCEKAQATVICCADEAALCAKCDIEVHAAnklaskHQ 43 7****99*******************6566666665 PP
2	zf-B_box	28.6	3e-09	53	95	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 + + C+ +++k + +fC +++ l+C+dC +++H+ H+ PHU15760.1 53 KLPPCDICQDKAAFIFCVEDRALFCKDCDEAIHSAsslaknHQ 95 6789*****************************6556666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MKIQCDVCEK AQATVICCAD EAALCAKCDI EVHAANKLAS KHQRLHLQCL SNKLPPCDIC 60 QDKAAFIFCV EDRALFCKDC DEAIHSASSL AKNHQRFLAT GIRVALSSSC NKDAVKSQLE 120 PQPPQQNTQQ VGLKMPPQQL SSITSPSWPV DDLLGFPDYE SSDKKELLEL GEFEWLGGID 180 LFGEQTAAEV PELSVPQSNN TNIYRPTKYN MPYKKPRIEM PDEDEYFTVP DLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	3e-87	DBB family protein