PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU15814.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 334aa MW: 36289 Da PI: 7.4054

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU15814.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.1	0.0013	138	160	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C+++F++ L H +H PHU15814.1 138 YECKTCNRTFPSFQALGGHRTSH 160 99*********999998888777 PP
2	zf-C2H2	13.5	0.00021	227	249	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg Fs+ L H+r+H PHU15814.1 227 HECSICGAEFSSGQALGGHMRRH 249 78********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MEFSEDSIDR TLVFKGKRSK RPRQFMAVAM VTSTSSTACD GGAGGGASGS NGGSGDVGRG 60 GHEIYSSSPT TSTTQISTSS TSEEDEDMAN CLILLAQSGR CEKLQVETTE RKMVKISSRK 120 FAEMATTSTG SKAGFYVYEC KTCNRTFPSF QALGGHRTSH KKIKTVTEDK KSTADSNSQL 180 QQGHHHQQQL LHQHEEKSSR IITPSVNYST GNSNSVANLI NIKPKIHECS ICGAEFSSGQ 240 ALGGHMRRHR PPTITTTATN TKNITVDEIS NTSDNSSHDE NSKENKPKIF LSLDLNLPAS 300 PEDHDHQRDA ANFEFSANQQ NLMFSAAALV DCHY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04390.1	2e-46	C2H2 family protein