PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU15918.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 228aa    MW: 26570.5 Da    PI: 7.9604
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU15918.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.37.3e-1864109148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+ E++l ++++ ++G++ W++Ia +++ gRt++++k++w++++
       PHU15918.1  64 RGKMTPHEEQLVLQLHSKYGNR-WSKIAGKLP-GRTDNEIKNYWRTHM 109
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 228 aa     Download sequence    
MDRTRRSSAS ILCEDVWRSS LGFSGESFRF EVGWRERKNK LGLKRSGKSC RLRWVNYLNP  60
GLKRGKMTPH EEQLVLQLHS KYGNRWSKIA GKLPGRTDNE IKNYWRTHMR KLAQDEKKNN  120
KASISPSSSN FSNCSSSSAN SPAVDSSTEQ NELLQVVEAN KTYEEDQNMM VYSMDEIWKE  180
VESSQEIETR NDLPVMASNT WDYCPDSLWM THDHYYYDNT QDFSFFTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G46130.48e-51MYB_related family protein