PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU16040.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 375aa MW: 42486.1 Da PI: 9.3209

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU16040.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	150.9	6e-47	1	122	6	128
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglk 103 rF+Ptdeel+++yLkkk+eg++ + ev++ev+i k+ePwdLp k+v ++++ew+fFs+r +ky++g++++rat+sgyWkatgk+++v+s +++++g+k PHU16040.1 1 RFSPTDEELISYYLKKKLEGSDKCV-EVVSEVEIWKHEPWDLPaKSVIQSDNEWFFFSPRGRKYPNGSQSKRATESGYWKATGKERNVKS-SSNVIGTK 97 8*******************777.99***********667777899**********************************.999* PP NAM 104 ktLvfykgrapkgektdWvmheyrl 128 +tLvf++grapkg++t+W+mhey + PHU16040.1 98 RTLVFHTGRAPKGQRTQWIMHEYCM 122 *********************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
RFSPTDEELI SYYLKKKLEG SDKCVEVVSE VEIWKHEPWD LPAKSVIQSD NEWFFFSPRG 60 RKYPNGSQSK RATESGYWKA TGKERNVKSS SNVIGTKRTL VFHTGRAPKG QRTQWIMHEY 120 CMSGNTNYQD SMVVCRLRKN SEFHLNDTPR NHRNQLVATD SATALSGAGQ LGSLELVNVG 180 DCCSKEGSSS FRSHSVEQID SGSESDRQTK EFSQHDSSGH FQDFDGEEDW FADIMKDDII 240 ELDDSSLNAR PISMIPIRPE SSEISNHEAQ ATMSSVVPFQ GTANRRLRLV RQVVTQCRVK 300 GSKPYKAIKM NKIGVGTTSS ARWLSNMFSV KWMRQYVIPI FLVTLTLLVM LLSLLEVSQQ 360 VKPRKRLLIL ASSRS

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

RFSPTDEELI SYYLKKKLEG SDKCVEVVSE VEIWKHEPWD LPAKSVIQSD NEWFFFSPRG  60
RKYPNGSQSK RATESGYWKA TGKERNVKSS SNVIGTKRTL VFHTGRAPKG QRTQWIMHEY  120
CMSGNTNYQD SMVVCRLRKN SEFHLNDTPR NHRNQLVATD SATALSGAGQ LGSLELVNVG  180
DCCSKEGSSS FRSHSVEQID SGSESDRQTK EFSQHDSSGH FQDFDGEEDW FADIMKDDII  240
ELDDSSLNAR PISMIPIRPE SSEISNHEAQ ATMSSVVPFQ GTANRRLRLV RQVVTQCRVK  300
GSKPYKAIKM NKIGVGTTSS ARWLSNMFSV KWMRQYVIPI FLVTLTLLVM LLSLLEVSQQ  360
VKPRKRLLIL ASSRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	3e-79	NAC family protein