PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16063.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 251aa    MW: 29146.4 Da    PI: 6.2986
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16063.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.52.4e-1819107399
                 EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 k+   +    +++l++p  f++ ++g+ ++    +led+  rsW+v +  +kk++ +++ +GW +Fv +n+L+ gDf++F++ g+s+f  +vk+++k
  PHU16063.1  19 KIY--HPQICEQQLRIPPAFLKFFNGDVPS--ICMLEDLAARSWKVVV--EKKDDNFFFMEGWVDFVLENNLEFGDFLTFSYAGNSKF--YVKIYEK 107
                 555..55566788********988555433..69**************..**********************************9999..9*99987 PP
2B334.73.1e-11162249698
                 ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 +++ +l+++rl +p  f +++ +k e++  +      + sW++ +    + +r+ l+kG ++F  +n L+e+D++ Fkl+++++  l+v++ r
  PHU16063.1 162 IKAWHLSNARLNFPAAFGNRF-LKREQP-LVATLRAGNASWRIVV---HCFDRFQLRKGMRKFITDNALRENDVCRFKLIDDEKLILNVRISR 249
                 56778999*********9877.445566.4555556789****99...7778899*************************9999999998876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MVTPVKYVSV PDELPEFFKI YHPQICEQQL RIPPAFLKFF NGDVPSICML EDLAARSWKV  60
VVEKKDDNFF FMEGWVDFVL ENNLEFGDFL TFSYAGNSKF YVKIYEKNGS LRQDVTALKE  120
PELVTSEEEN EQEEGVVAQP ADQTSERSRS PVASINSCEI VIKAWHLSNA RLNFPAAFGN  180
RFLKREQPLV ATLRAGNASW RIVVHCFDRF QLRKGMRKFI TDNALRENDV CRFKLIDDEK  240
LILNVRISRY K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.12e-17B3 family protein