PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16174.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 250aa    MW: 28502.8 Da    PI: 4.9045
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16174.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP268.51.2e-21100150155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++++GVr+++ +grW+AeIrdp+    r kr++lg+++t+eeAak +++a+ kl+g
  PHU16174.1 100 KKFRGVRQRP-WGRWAAEIRDPT----RgKRVWLGTYDTPEEAAKVYDKAAVKLKG 150
                 59********.**********84....35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MISSMDTPPI IKFTQHVVTT NKHVYENDEK SNPHTKVIQK VVRIILTDPD ATDSSDDEGR  60
NTVRRVKRHV TEINLMPSPK PITEKKRRSD SPETDVTRRK KFRGVRQRPW GRWAAEIRDP  120
TRGKRVWLGT YDTPEEAAKV YDKAAVKLKG SDAVTNFPRL LTTELTVTET ETESVTDGGE  180
KSDDVVALSP TSVLVNVDLT PFDNFGFCEV DDFGFDVDSF FRLPEFGMPE KYYGDEFGEF  240
DFDDFALEAR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
185101KKRRSDSPETDVTRRKK
286102KKRRSDSPETDVTRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.11e-37ERF family protein