PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU16213.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 584aa MW: 66272.5 Da PI: 4.5738

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU16213.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	66.3	9.1e-21	2	131	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 + G+rFhPtdeel+ +yL k v+ k+ ++ + i+ d+y +Pw++ + +++++ yfF+k +kk++ g+r r ++ g Wk +k+v+ PHU16213.1 2 ALGIRFHPTDEELI-RYLLKFVSCKSYSC-DNIRLEDLYGNkKPWEIFEsnslgDEYTNKNVRYFFTKLKKKKSDGTRFIRtVIGGGSWKGLDGEKSVY 98 67**********.9******999.78999999965496334444223345566**************8889************ PP NAM 94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +lvg k + + ++ W+m ey+l PHU16213.1 99 D-GPKLVGSTKNYRYQ-YKGYQADDVVWTMREYSL 131 .999999999985.455556699******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 584 aa Download sequence
MALGIRFHPT DEELIRYLLK FVSCKSYSCD NIRLEDLYGN KKPWEIFESN SLGDEYTNKN 60 VRYFFTKLKK KKSDGTRFIR TVIGGGSWKG LDGEKSVYDG PKLVGSTKNY RYQYKGYQAD 120 DVVWTMREYS LDEKILKALR RRRLIHYEDI VLCCVKGKIN VYARDHKELG DYTPSEHNHV 180 FHELQQDQNS AQLVNQVQNI KDMMAPFVAS YIEQGTANFQ DSSPVYPFTS SYKHNNAFQE 240 LQQDQNCEQL IKQVQTVDEM VPSASHDSYP VYPFTSSEHY AFHELHQDQN SEQVNVIHQE 300 NHIEETVPFA QYHNDDVTSY SEEGATNFQE YNVDCYRGAD FSSTLADLLN DIVTQPQLPI 360 RIDESGYDYQ LAQQMGSSSM VLNEGNIDAA AFVSDQWSTC CEEQVQNLEE AVPITFTEPT 420 APLVISNDEC FPMEGLFDTD DFIAADLRSC WAFSAIAATE GITKLSTGKS IFLSEQELVD 480 CDRTSEDQGC EGGYMEDAFE FIVKNKSITT EKRHPYKAAD GSCNTKKESS SAADIKGYGK 540 VPVNNKKALL NAVANQPVSV SIDASDFSFQ SARVEFLQAR VEPN

Sequence ? help Back to Top

Protein Sequence Length: 584 aa Download sequence

MALGIRFHPT DEELIRYLLK FVSCKSYSCD NIRLEDLYGN KKPWEIFESN SLGDEYTNKN  60
VRYFFTKLKK KKSDGTRFIR TVIGGGSWKG LDGEKSVYDG PKLVGSTKNY RYQYKGYQAD  120
DVVWTMREYS LDEKILKALR RRRLIHYEDI VLCCVKGKIN VYARDHKELG DYTPSEHNHV  180
FHELQQDQNS AQLVNQVQNI KDMMAPFVAS YIEQGTANFQ DSSPVYPFTS SYKHNNAFQE  240
LQQDQNCEQL IKQVQTVDEM VPSASHDSYP VYPFTSSEHY AFHELHQDQN SEQVNVIHQE  300
NHIEETVPFA QYHNDDVTSY SEEGATNFQE YNVDCYRGAD FSSTLADLLN DIVTQPQLPI  360
RIDESGYDYQ LAQQMGSSSM VLNEGNIDAA AFVSDQWSTC CEEQVQNLEE AVPITFTEPT  420
APLVISNDEC FPMEGLFDTD DFIAADLRSC WAFSAIAATE GITKLSTGKS IFLSEQELVD  480
CDRTSEDQGC EGGYMEDAFE FIVKNKSITT EKRHPYKAAD GSCNTKKESS SAADIKGYGK  540
VPVNNKKALL NAVANQPVSV SIDASDFSFQ SARVEFLQAR VEPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36160.1	9e-18	NAC family protein