PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16312.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 237aa    MW: 26559.6 Da    PI: 10.6998
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16312.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B366.73.4e-21104200295
                 EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS
          B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 
                 +kvl++sdv+++gr+vlpkk ae+h  +++++ ++ + +ed  ++r+W++k++y  ++ks++y+l+ ++ +Fv angL+egDf+v++   + +++++++
  PHU16312.1 104 QKVLKQSDVGSLGRIVLPKKEAETHlpQLESRDGISIAMEDiGTSRVWNMKYRYwpNNKSRMYLLE-NTGDFVLANGLQEGDFIVIY--ADiKCGKYLI 199
                 79*************************999999********7778*********777777777777.********************..4558887777 PP

                 E CS
          B3  95 k 95 
                 +
  PHU16312.1 200 R 200
                 6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MARQRRVPSH HFRHQTQNQR QISNEQSVMM GGQINSCAMS QPNNPGNWVY WPSAAAAATP  60
IVMVPQADAP QSLPMERRPS QKHGSTDKKQ ACSRTEKNLK FLLQKVLKQS DVGSLGRIVL  120
PKKEAETHLP QLESRDGISI AMEDIGTSRV WNMKYRYWPN NKSRMYLLEN TGDFVLANGL  180
QEGDFIVIYA DIKCGKYLIR GVKVRPNVAK SDGMQPAKKH VRKTAAVASP PVAQAVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24650.17e-77B3 family protein