PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16389.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 185aa    MW: 20740.6 Da    PI: 5.2292
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16389.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.000213961123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C  C++ F++   L  H++ H
  PHU16389.1 39 YECVFCKRGFNTAQALGGHMNIH 61
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MESSNQGDYS LNSSINKEVD QLQQDRQEYY YMGGGGRFYE CVFCKRGFNT AQALGGHMNI  60
HRKDKSTRNK PTTSTHNLLI SSSTNKNDIH ISSGANLRCY NVAEAQSNYL THFPELSTST  120
STNGQILLNH NAIDSSRDDD DNHNIQCLNL FGGTGAPYVI ETMEKNSEED DLDLELRLGH  180
DPLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.13e-14C2H2 family protein