PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU16597.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 128aa MW: 14749.3 Da PI: 5.0893

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU16597.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	94.5	1.1e-29	30	103	2	84
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEES CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhk 84 Fl k+y ++e++++++++sw+++g++fvv+++ efa+++Lp+ Fkhsnf+SFvRQLn+YgF+kv++++ weF+++ PHU16597.1 30 FLLKTYMLVENPATDDIVSWNSDGSAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVTTSR---------WEFSND 103 9****************************************************************998.........555444 PP

Sequence ? help Back to Top
Protein Sequence Length: 128 aa Download sequence
MEVLEEVQMS DHDKSLLDYV VMRKSSPSPF LLKTYMLVEN PATDDIVSWN SDGSAFVVWQ 60 PAEFARDLLP TLFKHSNFSS FVRQLNTYGF RKVTTSRWEF SNDXVPSQNL FYNYNNMKAY 120 TPTPGSPA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41690.1	1e-43	HSF family protein