PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16779.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 241aa    MW: 27015.2 Da    PI: 7.8548
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer105.24e-3351104357
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                  k +YkeClkNhA+s+GghavDGCgEf+ps ge+g++++lkCaAC+CHRnFHR+ +
   PHU16779.1  51 KPKYKECLKNHAVSIGGHAVDGCGEFLPS-GEDGSIDSLKCAACNCHRNFHRKIT 104
                  679*************************9.999*******************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 241 aa     Download sequence    
MEYEDQQKQT EEPTPNYPTT TTKMSPSPQF QLEPVQLEPV QLWTGSSTAT KPKYKECLKN  60
HAVSIGGHAV DGCGEFLPSG EDGSIDSLKC AACNCHRNFH RKITQPPPFT AGSGGGEPGP  120
FVYYRSIPPP PPPPYGYLQY HVATHQRPLA LPSTSGGGYR EDQEDIYNPN YSGGSGAKKR  180
FRTKFSQEQK DKMQEVADKL GWRIQREDED LVQQLCNETG LTRQVFKVWM HNNKHTLGKK  240
T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.12e-62ZF-HD family protein