PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU16791.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 278aa MW: 31296.2 Da PI: 6.8853

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU16791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.6	2.2e-13	65	111	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+ErrRR+riN +++Lr+llP+ K +Ka+ L +Av+++++L PHU16791.1 65 KSHSEAERRRRKRINGHLATLRTLLPNT-----IKTDKASLLAEAVRCVREL 111 69***********************8.....6************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MYQFPSFYEL GVNTCSDSYN NFLHEFINSS SSDQMFNNNN NINYVESSSV SPRSMAEAKA 60 IAANKSHSEA ERRRRKRING HLATLRTLLP NTIKTDKASL LAEAVRCVRE LKKTTSELEA 120 TTTTMSEYDD NDDDNNDHTT FMKTVMFPSE SDELNISYCR SNSSSSNNNS TDNSNETLII 180 KASICCEDRP DIMMELKRAL NSVQCKVVRA EMSTVGGRIK CVLWLELLEN GCKDGLLVQL 240 RRALKVVMDK NNFGPQNMGQ DLLGNKRPRL LGGPMNYV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68810.1	2e-31	bHLH family protein