PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16884.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family NAC
Protein Properties Length: 225aa    MW: 26683.7 Da    PI: 4.9871
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16884.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM70.15.9e-22118553128
         NAM  53 aeekewyfFskrdkkyatgkrknr..atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                 ++ ++wyfF++r++ky+tg+r+ r    k+g+Wkatg d e+++++g+ +g k tL fy+   +k ekt+W mheyr+
  PHU16884.1  11 KRGNNWYFFTQRKRKYKTGSRPDRrvENKKGFWKATGVDAEIKKNNGQIIGYKMTLDFYE---EKKEKTQWKMHEYRI 85 
                 45679*****************99544569*****************************4...44468********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MSSTAAKNRH KRGNNWYFFT QRKRKYKTGS RPDRRVENKK GFWKATGVDA EIKKNNGQII  60
GYKMTLDFYE EKKEKTQWKM HEYRIDKKME LEKYVLCEIY INTAAKIDDI DEDNINIIDQ  120
GDLIPENLDE KNFENINKNL ELKSSHTNDN IIIRPQSNNI DDVRDSCNND NIIDQDDLIP  180
ENLDEQNFES IINNLEFDDD HYVHEFKGFD ELGVIFQMKN KNTST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.12e-20NAC family protein