PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU16893.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 455aa    MW: 51474.5 Da    PI: 4.2957
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU16893.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B342.51.2e-13194281196
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                 ffk+ ++++++k++   +p +f++e+g +   +  ++le ++g +W+vkl  ++++g+++l++GW++F +   +  g f++F+++g+s+f   v +
  PHU16893.1 194 FFKIILSPHASKLH---IPSEFIAEYGAS--LGDAVSLEIPNGVVWKVKL-QKNSDGMVWLKEGWNKFKEYYTIACGYFLLFRYKGNSQF--SVFI 281
                 78888777777766...*********976..7779***************.3555666****************************9999..5555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    
MLNEKMEEEQ DWILDPIQAL NRGRNCGVNG VSVGKLLLDD LVYKQKHTNM CSKRKERRNK  60
MKKGIWMDRD IKLSSTFTCG SNKYLSSVSF QKQMQNFDIT LPQEQQPAEM VDRREEQPPE  120
MVDRLEVNPA EMADRQEEQP PEMVDSRPTE MVDRQEVNPA EMADRREEQP AGMEDRRGQE  180
EPRPVDTPEI NTHFFKIILS PHASKLHIPS EFIAEYGASL GDAVSLEIPN GVVWKVKLQK  240
NSDGMVWLKE GWNKFKEYYT IACGYFLLFR YKGNSQFSVF IFDLTSTEIE YPPGPNDEDT  300
TPDNRSVAFD PTGPNEDTTP DNRSVAVDPP GPNEATTPDN RSVAFDPPGP NEDTIPDNRS  360
VAVDLPGPNE ATTPDNPSVA FEPPEENRIN LPLSSEPPDE NVINSSLPIE PRVENVINLP  420
PPREPPEENA INLPPPGIYT MEELSRAFML SQPKV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15360KRKERRNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-24B3 family protein