PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU17086.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NF-YB

Protein Properties

Length: 167aa MW: 18112.1 Da PI: 4.8629

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU17086.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	172.4	5e-54	29	123	1	95
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdr+lPian++rimkk lP+naki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddl+wal+tlGfedy+eplk yl +yre ++ PHU17086.1 29 VREQDRYLPIANIGRIMKKGLPTNAKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLIWALTTLGFEDYIEPLKGYLIRYREGDT 123 69*****************************************************************************************9665 PP

Sequence ? help Back to Top
Protein Sequence Length: 167 aa Download sequence
MAEVPASPGG GGASHESGGG DEQSPQSNVR EQDRYLPIAN IGRIMKKGLP TNAKIAKDAK 60 DTVQECVSEF ISFITSEASD KCQKEKRKTI NGDDLIWALT TLGFEDYIEP LKGYLIRYRE 120 GDTKGSVRAG DTSARKDIVG GHLGPSSQQF VYDGSFTQDL DYGNSQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G53340.1	3e-68	NF-YB family protein