PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17353.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family G2-like
Protein Properties Length: 300aa    MW: 33774.6 Da    PI: 9.0181
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17353.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like104.18.2e-331972255
     G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                prlrWtp+LH++Fv+a+e+LGG++kAtPk +l++m+v gLt++hvkSHLQ+YR+
  PHU17353.1 19 PRLRWTPDLHHCFVHAIEKLGGQDKATPKLVLQMMDVRGLTISHVKSHLQMYRS 72
                8****************************************************7 PP
2Myb_DNA-binding48.91.5e-152071148
                     TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT++++  +v+a+++lGg    t+k++ ++m   g+t  ++ks++q+y+
       PHU17353.1 20 RLRWTPDLHHCFVHAIEKLGGQdkaTPKLVLQMMDvRGLTISHVKSHLQMYR 71
                     89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MGNCGRNGGV RQYIRSKVPR LRWTPDLHHC FVHAIEKLGG QDKATPKLVL QMMDVRGLTI  60
SHVKSHLQMY RSMKNDVNRQ AERMSTQQRK HQSLEDHDCH YQKQEGVCVE QQKLLVYQHY  120
PSFSSSPMER SDSTQYFNSI LPTKRARIEV CSNQRIREAV SNQYNSRNDY IEKNGVKGER  180
AGFIWQQNSE TNRQTAHPLC NSSSTTTLFF NPLKRSNEIQ ESEFFKVTKT QDSNAGGGGG  240
GEDNGECGLS LSLSLHRPST QRSNASSIIS EIGETISSYS AGSNVNQQSV SVDLNLSIAL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.16e-35G2-like family protein