PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17856.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 230aa    MW: 25354 Da    PI: 6.1374
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17856.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY57.43e-1861119257
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--S CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHn 57 
                 +D y+WrKYGqK + g+++pr  YrC+ +     +++k v+rs+ +p  +e+tY g+  
  PHU17856.1  61 EDRYSWRKYGQKLIVGAKYPREHYRCACRclsYREATKMVQRSEAEPLSFEVTYGGSNS 119
                 79************************9987767789******************99866 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MGEGGRGTKS WMGEEGHVTG SRAMHKMGCR RLQSSALKGA SRAHPGAEYI QARSGEEVPP  60
EDRYSWRKYG QKLIVGAKYP REHYRCACRC LSYREATKMV QRSEAEPLSF EVTYGGSNSC  120
GQENKNQNGE RVVLTKETQR DEVGRAAGET PECYTPEMVS TPNTSFNNSS AGVVFSNSNP  180
VFNITNSDLI PTPTSSPYPD TDISLEDDSL TVLFDDVPEN ARSTYKCNAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.21e-21WRKY family protein