PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17900.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family FAR1
Protein Properties Length: 182aa    MW: 20638 Da    PI: 5.9448
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.49.7e-08901314990
        FAR1  49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                 +k + ++++++ +Cka++  + ++d   +vtk+ leHnHel 
  PHU17900.1  90 RKIKARNQSKEADCKARVSSHVMNDVSSVVTKVILEHNHELE 131
                 466789999*******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MDHNDSSSQL KGTSNDILEL EDSDSLHHED LSVFDGEKYD HGEDDVEEEE GAMHDDSYTD  60
EQYMARPIAG KCKKLVGQIK YVTFRYDKCR KIKARNQSKE ADCKARVSSH VMNDVSSVVT  120
KVILEHNHEL ESALSRFLPC HRELSRTLKR SLVAHDIAGL RPSKSIRLLE VEAGGPERMT  180
HS