PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU17930.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

NAC

Protein Properties

Length: 454aa MW: 50730.2 Da PI: 6.5098

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU17930.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	56.3	1.1e-17	6	80	54	128
NAM 54 eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128 + kewyf s++ +ky++g++ + ++gyW+ g d +++ +g+l+g +ktL + +g ++++ ++t+W+mheyrl PHU17930.1 6 QAKEWYFLSPSTQKYTEGSQCYSSNTDGYWEPCGADSLIHK-DGKLIGYRKTLNYNEGkHEKDRKRTEWLMHEYRL 80 678****************999999********99.99********9934455679******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 454 aa Download sequence
MYHPSQAKEW YFLSPSTQKY TEGSQCYSSN TDGYWEPCGA DSLIHKDGKL IGYRKTLNYN 60 EGKHEKDRKR TEWLMHEYRL DRSRDVRTGS TSDDMQWVFC KLFKSSDKFL AAEDKVVTKF 120 AGPTDGVSST DHTIQGPEEA NDVMDHKGPS NGRTCDLQSL PETDQRTTTP YSSSKLLDQA 180 SKISSFDKPV TCSQRDQGTI VSTPTRQYVQ RTTVTLSPPA SDQGFMMPHL PNAKSQLTCD 240 QGTRHSPPLP QNYQRTKPPT SIGSHKANSG MVTDKDSSKS LSCDLRPQDV ASSQGLVISR 300 YSDKILDEPT GICSFDGTIA NHELGTMLPS RPQHGKQKVP PEQTMVPPLS GIHNVNNDEI 360 SAKPPTLNRH CVASDLPSSD QVPKRPLVEG SPRDSHENEA AVAPGYDGWL LYTTERLSPF 420 NGPFESLTEE ELAFFDKPDP EYPQAYEKKR PRNY

Sequence ? help Back to Top

Protein Sequence Length: 454 aa Download sequence

MYHPSQAKEW YFLSPSTQKY TEGSQCYSSN TDGYWEPCGA DSLIHKDGKL IGYRKTLNYN  60
EGKHEKDRKR TEWLMHEYRL DRSRDVRTGS TSDDMQWVFC KLFKSSDKFL AAEDKVVTKF  120
AGPTDGVSST DHTIQGPEEA NDVMDHKGPS NGRTCDLQSL PETDQRTTTP YSSSKLLDQA  180
SKISSFDKPV TCSQRDQGTI VSTPTRQYVQ RTTVTLSPPA SDQGFMMPHL PNAKSQLTCD  240
QGTRHSPPLP QNYQRTKPPT SIGSHKANSG MVTDKDSSKS LSCDLRPQDV ASSQGLVISR  300
YSDKILDEPT GICSFDGTIA NHELGTMLPS RPQHGKQKVP PEQTMVPPLS GIHNVNNDEI  360
SAKPPTLNRH CVASDLPSSD QVPKRPLVEG SPRDSHENEA AVAPGYDGWL LYTTERLSPF  420
NGPFESLTEE ELAFFDKPDP EYPQAYEKKR PRNY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	2e-19	NAC family protein