PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU17990.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 188aa    MW: 21276.9 Da    PI: 8.0474
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU17990.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.55.9e-174898255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y GVr ++ +g+++AeIrd + ng   r++lg+f +aeeAa a+++ +++++g
  PHU17990.1 48 HYIGVRARP-WGKFAAEIRDSTRNG--IRVWLGTFNSAEEAAMAYDQVALSMRG 98
                799******.**********44465..*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MNLKIKDEKQ TSNSMESLIS LEDTLSSSDI SSKENDFCLE RPQNEAKHYI GVRARPWGKF  60
AAEIRDSTRN GIRVWLGTFN SAEEAAMAYD QVALSMRGPS TCLNFPVERV SKMLQETQNC  120
NFFKNGLSPA AALKEKHKKR SSSNISRKKG KRKQKVNNEE ENNNIVFIFE DLGSDLLDEL  180
LSEYSSSN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1136149KHKKRSSSNISRKK
2147154RKKGKRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.14e-37ERF family protein