PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18068.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 273aa    MW: 30650.9 Da    PI: 8.066
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18068.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.75.9e-18185235255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrdps   k  r++lg+f+t  +Aa+a++ a+ k++g
  PHU18068.1 185 NYRGVRRRP-WGKYAAEIRDPSR--KGSRIWLGTFDTDVDAARAYDCAAFKMRG 235
                 59*******.**********854..34**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MTTQDEGLTL ELIRRHLLED FTNTESFINS LNSCFSDHMS PVFITSIVKT EPSTSTSLSD  60
SPNSSYLNEP NSPISRYFNL HSDFPEFKID SDIILSPTYS SAVSSSTKEN KNNELKTAFK  120
TDSDNILSPT YNSSAVSSST NKNKNNEHKN AFQTDADDIV NPTHDNNCDI SSSIKENKST  180
ETKKNYRGVR RRPWGKYAAE IRDPSRKGSR IWLGTFDTDV DAARAYDCAA FKMRGRKAIL  240
NFPLDAGKSG APANIGRKRR RDSKMELMEV LNF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1257261RKRRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.17e-46ERF family protein