PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18261.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 250aa    MW: 28211.8 Da    PI: 8.6093
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18261.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.52.2e-19182216135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
  PHU18261.1 182 CQHCGVDKTPQWRGGPTGPKTLCNACGVRYKSGRL 216
                 *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MKMEIMDTTC FMVDDDILNF SLDDEKYQTS SSSFESSNTI GFLPHDHHSH SFPDFVEEEL  60
EWLSNKDAFP AVEFDIFSDD IPSVIFDHHS PVSVLENSST TTTSHSSCNV NVKENAVMSR  120
APGILQVPVN HPVGARSKRR RRTAFAEWGN QVKLKNTTKQ RLTLLSKPMT KAKKATSIGR  180
RCQHCGVDKT PQWRGGPTGP KTLCNACGVR YKSGRLLPEY RPANSPTFSA DLHSNSHRKV  240
LEMRKQRIME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24050.14e-49GATA family protein