PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU18492.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 663aa MW: 73547.6 Da PI: 5.6229

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU18492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.6	3.1e-29	212	265	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl PHU18492.1 212 KPRVVWSVELHQQFVQAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 265 79*****************.******************************8 PP
2	Myb_DNA-binding	43.8	5.8e-14	214	264	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v+av+qlG + +k+I + m+ g+t++++ s++qky+ PHU18492.1 214 RVVWSVELHQQFVQAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 264 678***********************************************7 PP
3	Response_reg	76.4	1e-25	32	140	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl+vdD+p+ +++l+q+l++ +y ev+ +e al +l+e++ +D+++ D+ mp+mdG++ll++ e +lp+i+++a ++++ + + + Ga PHU18492.1 32 VLVVDDDPTCLRILEQMLRNCHY-EVTKSNRAEIALSMLRENRngFDIVISDVHMPDMDGFKLLEHVGLEM-DLPVIMMSADDSKDVVMKGVTHGAC 126 89*******************.***********99999*******************6644.8******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l Kp+ +e+l + PHU18492.1 127 DYLIKPVRIEALKN 140 ********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 663 aa Download sequence
MNLVASSSVS WKSNSNNSDR VEKNEFPAGL RVLVVDDDPT CLRILEQMLR NCHYEVTKSN 60 RAEIALSMLR ENRNGFDIVI SDVHMPDMDG FKLLEHVGLE MDLPVIMMSA DDSKDVVMKG 120 VTHGACDYLI KPVRIEALKN IWQHVIRKKK HEWKDKDFEQ STNVEDGDQH QKPPEDVDYS 180 SSANEGNWKS SKRRKEEEDE TEERDDTSTL KKPRVVWSVE LHQQFVQAVN QLGIDKAVPK 240 KILELMNVPG LTRENVASHL QKYRLYLRRL SGVSQHQNGL NDSFMGHPEA AYGTMTSFSG 300 LELQALAATG QLPAQSLATF QAAALGRSAT KSAISMPLVD QRNLFSFENP KLRYPEGQQQ 360 LNNSNKQINL LHGIPTTMEP KQLADLHQSS QSFVAMNMQG NARMQQNNAL LMHMSQQQQK 420 QPSRGQMLNE SSNGQVSRPP LSMPQPLSSN GIPAAILSRN GIVDNVRGPV YNPVSQASSM 480 VDFSLNQTTE LQNSFPLVSS NSGMSTLTSK RLLPEEVNSD IKGSRGFPVG YDIFEELHQQ 540 KSQDWGIQNV GSAFGASDHS GIPGTLDVSP SMLVQQGISS MKKNGQNGNS PMGGPQLNLF 600 SGGNFLTVKA EQLPDTSYQS NFSLEQFGQD DLMSAILKQQ ESVGEVETEF GFDGYPPLDN 660 LPV

Sequence ? help Back to Top

Protein Sequence Length: 663 aa Download sequence

MNLVASSSVS WKSNSNNSDR VEKNEFPAGL RVLVVDDDPT CLRILEQMLR NCHYEVTKSN  60
RAEIALSMLR ENRNGFDIVI SDVHMPDMDG FKLLEHVGLE MDLPVIMMSA DDSKDVVMKG  120
VTHGACDYLI KPVRIEALKN IWQHVIRKKK HEWKDKDFEQ STNVEDGDQH QKPPEDVDYS  180
SSANEGNWKS SKRRKEEEDE TEERDDTSTL KKPRVVWSVE LHQQFVQAVN QLGIDKAVPK  240
KILELMNVPG LTRENVASHL QKYRLYLRRL SGVSQHQNGL NDSFMGHPEA AYGTMTSFSG  300
LELQALAATG QLPAQSLATF QAAALGRSAT KSAISMPLVD QRNLFSFENP KLRYPEGQQQ  360
LNNSNKQINL LHGIPTTMEP KQLADLHQSS QSFVAMNMQG NARMQQNNAL LMHMSQQQQK  420
QPSRGQMLNE SSNGQVSRPP LSMPQPLSSN GIPAAILSRN GIVDNVRGPV YNPVSQASSM  480
VDFSLNQTTE LQNSFPLVSS NSGMSTLTSK RLLPEEVNSD IKGSRGFPVG YDIFEELHQQ  540
KSQDWGIQNV GSAFGASDHS GIPGTLDVSP SMLVQQGISS MKKNGQNGNS PMGGPQLNLF  600
SGGNFLTVKA EQLPDTSYQS NFSLEQFGQD DLMSAILKQQ ESVGEVETEF GFDGYPPLDN  660
LPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	1e-173	ARR-B family protein