PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18493.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GATA
Protein Properties Length: 202aa    MW: 21804.8 Da    PI: 10.5642
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18493.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA581.3e-183670135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C+ Cgt+kTplWR gp g+k+LCnaCG++ rkk++
  PHU18493.1 36 CVDCGTSKTPLWRGGPAGPKSLCNACGIKSRKKRR 70
                ********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MVDPSDKGLV SDEMSSETTS PVKSSPETSQ SNVKTCVDCG TSKTPLWRGG PAGPKSLCNA  60
CGIKSRKKRR ALLGLDKEDK KSKKSVSSGH KSIGLQHQSN QTSDGSSSSE DSGSNNFVKN  120
IVSSSLKKKL LPFGREEVVL QKPRSRSTQK RKLGEVEQAA FLLMALSCGS FYNQRRTKME  180
KARRNDKCCG TLGSKTSTLL VG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.15e-32GATA family protein