PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18588.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 147aa    MW: 17516 Da    PI: 6.0529
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18588.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding28.14.6e-096302348
                     -HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                     +W++Ia++++ gRt++++k++w+++l
       PHU18588.1  6 RWSAIASRLP-GRTDNEIKNFWHTHL 30
                     4*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    
MFFFFRWSAI ASRLPGRTDN EIKNFWHTHL KKRLEQHNID LASTTTTKQN HEMTTNVTQN  60
IDHHIISPNY YQDSQNMVTY HPTYCHDHQE DFQENNSSSH DHTQSNKEEI MQYSTNYGHE  120
DMTSFNNDMV FWYNVFMSSG NNPSEIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.13e-16MYB family protein