PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU18614.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB_related

Protein Properties

Length: 189aa MW: 21575.9 Da PI: 5.6227

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU18614.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	45.3	2.1e-14	98	142	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r + Rt+ q+ s+ qky PHU18614.1 98 PWTEEEHRLFLIGLEKYGKGDWRSISRNVVVSRTPTQVASHAQKY 142 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 189 aa Download sequence
MSIWSRNDDK LFENALVLYP ENIADRFQLI ADYVPGKSID DIMAHYDDLV HDVFEIDSGR 60 IEFPGYTDDD SGLEGHSGRV ELEGDSGRVS AERKKGTPWT EEEHRLFLIG LEKYGKGDWR 120 SISRNVVVSR TPTQVASHAQ KYFIRQQAMK KERKRSSIHD ITTAVDTNTV PPQSSLQNQR 180 GTQNFNFAQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	1e-66	MYB family protein