PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU18763.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 181aa MW: 21237.3 Da PI: 9.6092

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU18763.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22	4.4e-07	58	80	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C+ sF r nL+ H r+H PHU18763.1 58 YVCEICNLSFQREQNLQMHRRRH 80 9*********************9 PP
2	zf-C2H2	17.9	8.8e-06	145	166	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++C+k + +s++k Hi+t+ PHU18763.1 145 ICQKCNKGYAVQSDYKAHIKTC 166 7*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 181 aa Download sequence
MLASHSFFFG SPSNYSDQFS SPENGFIIKR KRRPAGTPDP DAQVVYLTAE MLMESDRYVC 60 EICNLSFQRE QNLQMHRRRH KVPWKLKKKR DQEEEKNEMD QVIKKRVYVC PEPSCVHHDP 120 CHALGDLVGI KKHFRRKHSN YKQWICQKCN KGYAVQSDYK AHIKTCGTRG HSCDCGRVFS 180 R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	29	34	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68130.1	1e-90	C2H2 family protein