PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18827.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 104aa    MW: 11684.5 Da    PI: 7.4165
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18827.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.12.8e-10655255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GV+ ++ +g++ Ae rdp+    +  ++ l  f+taeeAa+a + ++  ++g
  PHU18827.1  6 HYRGVWKRP-SGKYTAETRDPR----KiCNILLCMFDTAEEAAQASDLMAIDFRG 55
                7*****999.7*********83....3599*****************99987775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
FVEEVHYRGV WKRPSGKYTA ETRDPRKICN ILLCMFDTAE EAAQASDLMA IDFRGVKVKT  60
DFLNLMDKMN WTPSNVGTVE SLNVVAVLAI QPSPLHFPPP KPPP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15210.16e-20ERF family protein