PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18867.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 234aa    MW: 26709.7 Da    PI: 9.7754
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18867.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.69.8e-18128215398
                 EE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   3 kvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                  +++ps+v+   +l lp +f++++   ++++ t+tl de g+++   +  +k++    l++GWk+F+ +++L +gD +vF+l++ ++f  +v ++r
  PHU18867.1 128 RTMLPSHVSGGFWLGLPSNFCRKNL--PRRDDTITLIDEMGEEFPTVYLAQKNG----LSGGWKRFAVDHDLADGDCIVFHLIRPTKF--KVYIIR 215
                 5799*****************9995..346679***************555555....9************************97777..888776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MVKYEEIRQQ RLEENKKRME ELNLPLLTQA LKNSTSPKPS PMKKTKPRIM GTELVAVRRS  60
PRVAKSPAPE YKEVIYYERV MIPRRLATPT KRDRLNFAYA TDEERAASIE KAEKLEASLG  120
SDYPALVRTM LPSHVSGGFW LGLPSNFCRK NLPRRDDTIT LIDEMGEEFP TVYLAQKNGL  180
SGGWKRFAVD HDLADGDCIV FHLIRPTKFK VYIIRVGNAS ERESTETTSS SEAF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.15e-67B3 family protein