PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18952.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 156aa    MW: 17750.9 Da    PI: 8.6112
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18952.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.68.4e-203384256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y+GVr +  +g+++AeIrdp+ +g  +r +lg+f+taeeAa+a+++a+ +l+g+
  PHU18952.1 33 KYRGVRKRT-WGKYAAEIRDPTRQG--ARQWLGTFDTAEEAARAYDKAAFSLRGH 84
                8*****887.**********96544..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEGNSSSSSS CKGKKVMQDV NKVGTKDNNE IIKYRGVRKR TWGKYAAEIR DPTRQGARQW  60
LGTFDTAEEA ARAYDKAAFS LRGHLAILNF PNEYYSKLND PPYYNYRTSL NVNVPSKCLE  120
RGISSIGQDE KIEFEYLDDS VLEELLGVDE PKVIRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.12e-37ERF family protein