PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18953.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 246aa    MW: 27825.4 Da    PI: 8.7132
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18953.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.21e-18100150255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+++AeIrd + ng   r++lg+f++aeeAa a+++a+  ++g
  PHU18953.1 100 SYRGVRRRP-WGKFAAEIRDSTRNG--IRVWLGTFDSAEEAALAYDQAAFLMRG 150
                 69*******.**********44465..**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MVTADTPPGF RPPLLTYRPP LQDVALHVVF VPRWSQLWLC PVGHDWHPSW VQAITTDTQA  60
TTLRCGSTRG FYSSLAQADT GTNTNRAPMA EPKPSSKAKS YRGVRRRPWG KFAAEIRDST  120
RNGIRVWLGT FDSAEEAALA YDQAAFLMRG TRAILNFSVE RVVESLHEMK CHVEEGCSPV  180
VALKKRHSLR KRKLNKKNCN VIKDETNYVT NVVVFEDLGV DYLEQLLSSN DHSSTSNDYQ  240
ELWSNE
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1189194LRKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23240.13e-45ERF family protein