PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU18955.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 110aa    MW: 12496 Da    PI: 4.0585
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU18955.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.75.3e-081443130
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIart 30
                     +g+W  eEd++l+ +++++G g+W++ ++ 
       PHU18955.1 14 KGPWAFEEDQILISYIQKYGHGNWRALPKQ 43
                     79***********************98875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 110 aa     Download sequence    
MVRAPCCDKT GLRKGPWAFE EDQILISYIQ KYGHGNWRAL PKQAVVTSDS SSSIIAFGVT  60
IDNTIAVKLE ESDSSEYLTE IDESFRTDDD MDFLFNFFIK AEDFSELPEL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.11e-20MYB family protein