PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU19053.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 210aa    MW: 23015.9 Da    PI: 9.7335
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU19053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.3e-182170255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++ +gr++AeIrdp     +   +++lg+f+ta eAa a++aa+ +++g
  PHU19053.1 21 HYRGVRKRP-WGRYAAEIRDP-----HrkCQVWLGTFDTAVEAAMAYDAAAIEFRG 70
                6********.**********6.....336***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MARRHRRTTA AAATATEKEV HYRGVRKRPW GRYAAEIRDP HRKCQVWLGT FDTAVEAAMA  60
YDAAAIEFRG VKAKTNFPIP TDVTRSPSEV STVESSTARV KVKKVEVPEE LVIVESSPLS  120
LDLTLGRSSY CLGSKLFSSQ TQNHLNARGG GGGGLDRGEM FHTNRFRSII MGSDAGDLSE  180
SDSSSVVDFI GNNTKDIQID LNFPSVPKNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.18e-26ERF family protein