PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU19056.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 163aa    MW: 17847.2 Da    PI: 8.3406
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU19056.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2232e-071339232
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfs 32
                +y+GVr+++ +gr++AeIrdp     +   +++
  PHU19056.1 13 HYHGVRRRP-WGRYAAEIRDP-----HrkCQVW 39
                69*******.**********6.....2235555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MARRHRRTAA AVHYHGVRRR PWGRYAAEIR DPHRKCQVWL VPEVSTVETS TAMTKVKKVG  60
VPEEQVIVES SSLPLDLTFG RSLYCLGSKF FSSQTQNNLD ACGGGGGLDR GEMCHTNGFG  120
SIIMGSDAGD LSESDSSSVV DFMGNDTKGI QIDLNFPPVL KKM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.16e-12ERF family protein