PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU19062.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 108aa    MW: 11645.9 Da    PI: 7.6829
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU19062.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.31e-14652255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr ++  gr+ AeI+         + +lg f+taeeAa a++aa+ +l+g
  PHU19062.1  6 KYRGVRKRS-GGRYQAEIWI------GYNKHLGMFDTAEEAALAYDAAAIRLRG 52
                8*****888.9*********......47889*********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
MAEEVKYRGV RKRSGGRYQA EIWIGYNKHL GMFDTAEEAA LAYDAAAIRL RGVNAKTNFP  60
IPSRRSSTGG GGGGVGDTVT VARQSESSSP ESRHIEIDLN LPPPPEDT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28360.11e-11ERF family protein