PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU19162.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 249aa    MW: 28483.2 Da    PI: 4.7206
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU19162.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.38.5e-061601971254
                 HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 R +++ +++  L++l+ +      +K + a++L++A++YI+ L
  PHU19162.1 160 RKEKLGDRITALQQLVSPF-----GKTDTASVLQEAIDYINFL 197
                 67788899********998.....8***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MVFQELTKND QNLLVDSTLQ ILDINGNSSS SSSSQDWNHS LQEVLTNSSQ NYQHQNELMR  60
NFSSISNQDF TNYYSNLIQT LFDSANEDHN QEQQPQQSLF ANNNNPPIND FEPSLPKSNI  120
EEIGESKSRL SIITKNSTNE PTYKRQRIET PSPLPTFKVR KEKLGDRITA LQQLVSPFGK  180
TDTASVLQEA IDYINFLHDQ VNVLRTQFVK NGSSTQHQQE HSHLDDGCWS NYCCPDEKEL  240
SLSFVLLQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.32e-33bHLH family protein