PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU19557.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 471aa MW: 54670.8 Da PI: 4.9654

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU19557.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31	4.3e-10	19	95	9	90
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 d + + +p f++e+++ kt l++ +g We k+ +r k g ++ ++ W++Fv+ ++Lk+g +++F l+++s+f PHU19557.1 19 DFVDK--ILMPPAFIKENKSM--LAKTCLLKTDEGVFWEAKI-VREKCGYFICEGDWSQFVEYHKLKQGNMLLFFLIDKSTF 95 44444..678****99754..77799**********.4555555888889****************99987777 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MLVDPNEHPS FYKLLFKEDF VDKILMPPAF IKENKSMLAK TCLLKTDEGV FWEAKIVREK 60 CGYFICEGDW SQFVEYHKLK QGNMLLFFLI DKSTFQVLPY KQIHFRKRPG RQVFEELSSS 120 SQEEEEEEEQ EEEEVEEEEE EEEEEEGEGE GEGEGEEEEE EEKEKEEREE EDISAPKISN 180 RFDRHSIDSS DHYARVEEEE QEDITPPRKS KKCKRHSIHL SDYYAQLCND SSSGSKDGES 240 PSYPLSGGNS NAKADTELHK MKAPGLKLLL KACQEKYKRP ADSIFGSRLG RRRRSRRNRD 300 PDKPKQPTTA FFVFMEEFRK QFGPGRFDVC AVGKAGGDKW NQLSETEKAP YIEEAKKRKV 360 EYTENMRAYY DRKASEAAPK EEESDKSRSV VVEEDEGGRQ LNKFPWMRKH VISSACAVEE 420 KEAENGSEGN GSKKISSSMT FNNKDPNFKM VVKKVSDTGQ PLKTYLRRKY R

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MLVDPNEHPS FYKLLFKEDF VDKILMPPAF IKENKSMLAK TCLLKTDEGV FWEAKIVREK  60
CGYFICEGDW SQFVEYHKLK QGNMLLFFLI DKSTFQVLPY KQIHFRKRPG RQVFEELSSS  120
SQEEEEEEEQ EEEEVEEEEE EEEEEEGEGE GEGEGEEEEE EEKEKEEREE EDISAPKISN  180
RFDRHSIDSS DHYARVEEEE QEDITPPRKS KKCKRHSIHL SDYYAQLCND SSSGSKDGES  240
PSYPLSGGNS NAKADTELHK MKAPGLKLLL KACQEKYKRP ADSIFGSRLG RRRRSRRNRD  300
PDKPKQPTTA FFVFMEEFRK QFGPGRFDVC AVGKAGGDKW NQLSETEKAP YIEEAKKRKV  360
EYTENMRAYY DRKASEAAPK EEESDKSRSV VVEEDEGGRQ LNKFPWMRKH VISSACAVEE  420
KEAENGSEGN GSKKISSSMT FNNKDPNFKM VVKKVSDTGQ PLKTYLRRKY R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	1e-08	B3 family protein