PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU19605.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 247aa    MW: 26952.8 Da    PI: 5.2662
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU19605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.3e-173988255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++a  ++l+g
  PHU19605.1 39 KYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAGLLCLKG 88
                8*****998.**********9...336********************9999987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
MVKTEQKSLA EPSKTSMSLS SSSSTSSSNN NNMKMKKNKY KGVRMRSWGS WVSEIRAPNQ  60
KTRIWLGSYS TPEAAARAYD AGLLCLKGPS ASHNLNFPFD SSFYHHIDHT STTLSPKAIQ  120
RVAAAAAATA EGGGNQNIGS VSLFDDTNLI LSSPSPPLSS KSTSSSSPLS HADQFDDVCL  180
LQNYSTAATT ATFDQEITAV SMIEQWYNFD SPKYNDMLDG TVFFDPPSME DIYYEEGSAD  240
IPLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.15e-39ERF family protein