PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU19730.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRAS
Protein Properties Length: 563aa    MW: 62877.7 Da    PI: 4.8145
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU19730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS443.11.9e-1351955633374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 + L++cA a+++g+ e+a++++++l++++s +gdp++R aay++eALaar+a s+ +lykal+++e++   sse+l+a+++++ev+P+++f++++aN a
  PHU19730.1 195 QMLFSCAAAIQDGNIEQASSVINELRQMVSIQGDPLERTAAYMVEALAARMATSGRGLYKALKCKEAT---SSERLSAMQVLFEVCPYFRFGFMAANGA 290
                 79*****************************************************************9...9*************************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkp 198
                 +lea++ e+rvHiiDfdi+qG Q+ ++lq+L s p++pp+lR+Tgv++pes      +l+ +g rLa++A+ l++pfef++ v ++++ +++ +L+++p
  PHU19730.1 291 LLEAFKDEKRVHIIDFDINQGSQYYTFLQTLGSMPGKPPHLRLTGVDDPESIqrAVGSLNVIGLRLAELAKDLKIPFEFQA-VPSNTALVTPTMLKCRP 388
                 **************************************************99778899***********************.79*************** PP

        GRAS 199 gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnv 297
                 gEa+ Vn+++qlh+++desvs+ ++rd++L++vksl+Pk+v+vveq++++n+++Fl+rf+e  +yysa+f+sl+a+l+r+s+er++vEr++l+r+i n+
  PHU19730.1 389 GEAVLVNFAFQLHHMPDESVSTVNQRDQLLRMVKSLNPKLVTVVEQDMNTNTAPFLQRFAEVYSYYSAVFESLDATLSRDSQERVNVERQCLARDIINI 487
                 *************************************************************************************************** PP

        GRAS 298 vacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 vaceg er+er e ++kWr+r+++aGF+p p+s ++++++k+l+++++++ y+ +ee g+l++gW+d++++++SaW+
  PHU19730.1 488 VACEGLERIERYEVAGKWRARMMMAGFTPCPISRNVYDSIKTLIKQYSER-YTAKEEAGALYFGWEDKNMTVASAWK 563
                 ************************************************66.*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    
MSLVRSVRSI GNGKLYFPNG HNDNSSLSTS IYTKNARGIT YATESSSTDS YDPKYLLDSP  60
SPSEELLNIS PTDALGNPFH QRHSSSFQPS RDYNQGSCDS GDFVNQSPDS SEYNDGRVTM  120
KLQELERVLF DDNELEGDDV CAHGETMDID DEWFSQIRTV LLQDSPKEST SADSNISSSS  180
SYKEISVTAP QTPKQMLFSC AAAIQDGNIE QASSVINELR QMVSIQGDPL ERTAAYMVEA  240
LAARMATSGR GLYKALKCKE ATSSERLSAM QVLFEVCPYF RFGFMAANGA LLEAFKDEKR  300
VHIIDFDINQ GSQYYTFLQT LGSMPGKPPH LRLTGVDDPE SIQRAVGSLN VIGLRLAELA  360
KDLKIPFEFQ AVPSNTALVT PTMLKCRPGE AVLVNFAFQL HHMPDESVST VNQRDQLLRM  420
VKSLNPKLVT VVEQDMNTNT APFLQRFAEV YSYYSAVFES LDATLSRDSQ ERVNVERQCL  480
ARDIINIVAC EGLERIERYE VAGKWRARMM MAGFTPCPIS RNVYDSIKTL IKQYSERYTA  540
KEEAGALYFG WEDKNMTVAS AWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21450.10.0GRAS family protein