PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHU19770.1

Organism

Capsicum chinense

Taxonomic ID

80379

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

CAMTA

Protein Properties

Length: 235aa MW: 26969 Da PI: 6.5075

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHU19770.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	125	3.3e-39	1	78	39	116
CG-1 39 liLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcywlLeeelekivlvhyle 116 ++L+n++++ryfrkDG+sw+k+kdgktv E+he+LKvg+ e+l+cyY h+e+n +fq r+yw+L+ ++e+ivlvhy++ PHU19770.1 1 MFLFNKRVLRYFRKDGHSWRKRKDGKTVGEAHERLKVGNSEALNCYYEHGEKNFNFQGRSYWMLDLAYEHIVLVHYRD 78 79**************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MFLFNKRVLR YFRKDGHSWR KRKDGKTVGE AHERLKVGNS EALNCYYEHG EKNFNFQGRS 60 YWMLDLAYEH IVLVHYRDIT EIAAFMSQSS PISSTFSLSP SLYSTQHPGF TVVGSESYQQ 120 YQNESCPGYR EICSDALINS NGMKISDITR RTEGVSSSPR VEISQALRRL EEQLSLNDDS 180 SAETYPLYSE IKNSNDAENL IHDKSSVVQF QDNSNNLLLL PHSGFLSCFV PRDYC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	3e-42	CAMTA family protein