PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU19875.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 201aa    MW: 23253 Da    PI: 10.1057
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU19875.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.14e-131459247
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++WT++E+  ++++ k++G+g+W+ Ia+ +  +Rt  q+ s+ qk+
       PHU19875.1 14 NPWTEDEQIAFLKGLKLHGKGNWANIAKDFLPNRTSTQIASHSQKH 59
                     58***************************999**********9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    
MFRKDYRRKI KKANPWTEDE QIAFLKGLKL HGKGNWANIA KDFLPNRTST QIASHSQKHF  60
MRLDVNSNER KHHKKSSVFD IHLKKIEDIE HAIVPLENNQ ESLHVPIFLP NFNLTKRIQV  120
PKVTPVTWVY MYPYHQYTST SAKLLETIFC FLDFQDIKES PILIRDPVID FFVKGQAVQS  180
APLSSVIKVI GSLDKSIPCP G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.12e-19MYB_related family protein