PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHU19876.1
Organism
Capsicum chinense
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family MYB_related
Protein Properties Length: 150aa    MW: 16953.5 Da    PI: 10.5833
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHU19876.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.51.5e-135499247
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++WT++E+  ++++ k +G+g+W++Ia+ +   Rt  q+ s+ qk+
       PHU19876.1 54 NPWTEDEQIAFLKGLKFHGKGNWAKIAKDFLPSRTSTQIASHAQKH 99
                     69***************************999************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
MAMGRRNCTL CGGNGHNQRT CIEKGKSIKL FGVEITTSTV AAMSKIGRKI KKGNPWTEDE  60
QIAFLKGLKF HGKGNWAKIA KDFLPSRTST QIASHAQKHF MRLDANSSER KYLKKSSVFD  120
LHLEKTEDRE HAIVPVETHH VPSFLSNYNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.18e-27MYB_related family protein